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sequencing

Papers (8)

Diversity and Phylogeny of Symbiotic Bacteria Nodulating Common Bean (Phaseolus vulgaris L.) in Côte d’Ivoire

Marie-Paule Aboueuh Atse, Mako François De Paul N’gbesso, Allepo Innocent Abe, Noupé Diakaria Coulibaly, Katiénapariga Tayourou Yeo, Louis Butare & Ibrahim Konate · Microbiology Research Journal International · 2024

Phaseolus vulgaris L. (common bean) is an agriculturally important legume that benefits from a symbiosis with bacteria belonging to the genus Rhizobium. Growing interest in the use of rhizobia as biofertilizers has led to the identification of a large number of rhizobia strains a...

Open access Research Article 10.9734/mrji/2024/v34i71457

Genotyping of Canine Distemper Virus Lineage in Clinically Infected Dogs in Puducherry, Southern India

Megavarnan Abirami, Mouttou Vivek Srinivas, Jayalakshmi Vasu, Prabhakar Xavier Antony, Jacob Thanislass, Muthuraj Muthaiah & Hirak Kumar Mukhopadhyay · Microbiology Research Journal International · 2020

Aims: This study aimed to determine the Canine Distemper Virus (CDV) lineage circulating in the Puducherry region (Southern India) and how they are genetically and antigenically related to the vaccine and other known CDV lineages around the world. Study Design: The study involved...

Open access Research Article 10.9734/mrji/2020/v30i730235

Optimization of Soil DNA Extraction Protocol Using Na2EDTA, SDS, Heating, Vortexing and CaCl2 and Its Validation for Metagenomic Studies

Malik Ahmed Pasha, Sachin A. More & P. U. Krishnaraj · International Journal of Environment and Climate Change · 2020

Aim: Several methods described previously for isolation and purification of soil DNA. Most of these protocols use combination of techniques or methods but the role and contribution of each individual method or component used is not clearly discussed. This study aims at analysing...

Open access Research Article 10.9734/ijecc/2020/v10i630201

Plasmid-Mediated Quinolone Resistance Genes qnrA, qnrB, qnrC, qnrD, qnrS and aac (6')-Ib in Pseudomonas aeruginosa and Acinetobacter baumannii

Sahar A. M. Ali, Reem M. M. Hassan, Sahar M. Khairat & Amira M. A. Salama · Microbiology Research Journal International · 2018

Background: The emergence and spread of antimicrobial-resistant bacterial isolates is of great concern, especially to commonly used antimicrobials as Quinolones. Aim of the Study: Estimation of the prevalence of quinolone-resistant P. aeruginosa and A. baumannii in various clinic...

Open access Research Article 10.9734/MRJI/2018/44295

Genotyping Human Papillomavirus in Women Attending Cervical Cancer Screening Clinic in Harare, Zimbabwe

Takudzwa Matuvhunye, Racheal S. Dube- Mandishora, Nyasha Chin’ombe, Graham Chakafana, Joshua Mbanga, Edward Zumbika & Babill - Stray Pedersen · Microbiology Research Journal International · 2016

Aim: To determine the prevalence of human papillomavirus genotypes in women attending a cervical cancer screening VIAC (visual inspection with acetic acid) clinic. Study Design: Cross-sectional study. Place and Duration of Study: VIAC clinic at Parirenyatwa Referral Hospital in H...

Open access Research Article 10.9734/BMRJ/2016/28481

Detection of A2142G and A2143G Substitutions among Clarithromycin-resistant Helicobacter pylori Strains Isolated from Egyptian Patients

Eman A. El-Masry, Nahla A. Melake, Ahmed A. Salama & Amal F. Makled · Microbiology Research Journal International · 2016

Background: Clarithromycin is the most commonly recommended antibiotic in Helicobacter pylori (H. pylori) eradication regimens, but the prevalence of clarithromycin-resistant H. pylori is increasing. Clarithromycin-resistance is associated with mutations in the 23S rRNA gene. The...

Open access Research Article 10.9734/BMRJ/2016/26157

Molecular Characterization of Bacteria Isolates from Farm-Raised Catfish Clarias gariepinus (Burchell, 1822)

A. A. Akinyemi & O. O. Oyelakin · Microbiology Research Journal International · 2014

Selected bacterial isolates from skin, gut and gills of Clarias gariepinus were collected from five fish farms at Ijebu Ode. The isolates were assessed using 16S rRNA gene sequencing method to identify them and to construct the phylogenetic relationship. A total of 10 isolates we...

Open access Research Article 10.9734/BMRJ/2014/11996

Isolation and Molecular Biological Characterization of Fowlpox Virus from Specimen of Cutaneous Nodular Lesions from Chickens in Several Regions of Tanzania

S. N. Masola, A. Mzula, H. N. Tuntufye, C. J. Kasanga & P. N. Wambura · Microbiology Research Journal International · 2014

Aim: To investigate molecular and evolutionary characteristics of genes of fowlpox virus (FWPV) isolates from chickens in Tanzania. Study Design:  Experimental. Place and Duration of Study: Faculty of Veterinary Medicine, Sokoine University of Agriculture, Morogoro, Tanzania; bet...

Open access Research Article 10.9734/BMRJ/2014/8420