Skip to content
Research Article Open access CC BY 4.0

Extrapolation of the Species Accumulation Curve for Incomplete Species Samplings: A New Nonparametric Approach to Estimate the Degree of Sample Completeness and Decide when to Stop Sampling

Jean Béguinot

Annual Research & Review in Biology · pp. 1–9 · Published 6 Nov 2015

10.9734/ARRB/2015/22351

Abstract

Incomplete species samplings are deemed to remain the common practice in those groups of animals, such as small or micro- invertebrates, with numerous species that often are more or less difficult to detect in the field. Thus, extrapolating the Species Accumulation Curve as far as possible beyond the actual sample size may thus serve as a useful (although imperfect) surrogate to the desired, but practically inaccessible, complete samplings. In this context, several kinds of theoretical or empirical models for the Species Accumulation Curve and also a lot of estimators of the asymptotic limit of the Curve (i.e. total species richness) have been proposed. The practical issue is now to select appropriately among these numerous, different propositions. Here, I show that realistic Species Accumulation Curves are constrained to respect a general mathematical relationship, which, in turn, may serve to discriminate and select among the available models of Species Accumulation Curves and, as well, among the different formulations of the estimators of species richness that are commonly referred to. As a result of the application of this screening approach, it follows that, for the generality of cases (i.e. ratio singletons/doubletons larger than 0.6), a specific formulation of the Species Accumulation Curve (bi-hyperbolic with exponents -1 and -2 for sample size) complies at best. Accordingly, the more appropriate estimator of total species richness is Jackknife-2. Only when the ratio singletons/doubletons happens to fall beneath 0.6, Chao estimator may then be preferred. This is the case when samplings closely approach exhaustivity or when they address assemblages with unusually homogeneous abundances of species.

Extrapolation species accumulation curve sample completeness stop sampling non-parametric point estimation species richness jackknife Chao estimator

Cited by 11

Estimation of the number of tree species in French Guiana by extrapolation of permanent plots richness

É. Marcon, Ariane Mirabel, J. Molino · Journal of Tropical Ecology · 2024

Mesures de la Biodiversité

Eric Marcon · 2015

Article metrics

Real usage data collected on this platform.

0

Page views

0

PDF downloads

0

Outbound clicks

11

Citations

Views by country

Approximate, from request IP at view time — not citizenship or institution. Countries with fewer than 5 views are grouped as "Other".

No views recorded yet.

Traffic sources

Referring site, by host.

No traffic recorded yet.

Views and downloads exclude known bots/crawlers. Citations combines this platform's own DOI-resolved index with each external source's own reported total — see Cited by above for individually listed citing works. Last refreshed 0 seconds ago.